Miyakogusa Predicted Gene

Lj3g3v3302740.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LJR4_SOYBN 991 81.0 86.8 (tr|I1LJR4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G31510.1 801 72.6 82.9 | Symbols: ARI7, ATARI7 | IBR domain-containing protein | chr2:13416991-13421170 REVERSE LENGTH=562
Medicago Medtr4g066650.1 981 80.1 85.9 | E3 ubiquitin-protein ligase ARI7, putative | HC | chr4:25205224-25212823 | 20130731
Soybean Glyma11g13750.1 991 81.0 86.8  
LJGI gnl|LJGI|TC60435 2793 99.4 99.4 similar to UniRef100_A7R4B5 Cluster: Chromosome undetermined scaffold_644, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_644, whole genome shotgun sequence - Vitis vinifera (Grape), partial (76%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3302740.1 length: 589 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 9.362 136-180
IPR001876 Zinc finger, RanBP2-type
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00547 Zinc 1.5e-05 563-587
PatternScan PS01358 ZF_RANBP2_1 NA 565-584
ProfileScan PS50199 ZF_RANBP2_2 8.739 561-589
IPR002867 Zinc finger, C6HC-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF01485 IBR 1.6e-10 205-267
285-331
HMMSmart SM00647 In 0.037 205-267
271-341
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.4e-05 132-191
no_ID  
HMMPanther PTHR11685 ARIADNE 0 1-563
HMMPanther PTHR11685:SF10 ARI-LIKE 0 1-563
Seg seg seg NA 31-48
531-548
549-563
superfamily SSF57850 RING/U-box 6.7e-13 129-229
286-344
205-273
superfamily SSF90209 Ran 6e-06 559-589
Wolf-PSORT
Lj3g3v3302740.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3302740.1