Miyakogusa Predicted Gene

Lj3g3v3261490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NDI0_SOYBN 581 66.3 73.7 (tr|I1NDI0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G13730.1 256 39.6 55.0 | Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr1:4710519-4712332 FORWARD LENGTH=428
Medicago Medtr4g083150.2 549 63.2 70.5 | ras-GTPase-activating protein-binding protein, putative | HC | chr4:32360690-32356002 | 20130731
Soybean Glyma20g03060.1 581 66.3 73.7  
LJGI gnl|LJGI|TC59549 1289 99.7 99.7 similar to UniRef100_A7P2E7 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3261490.1 length: 463 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 3.8e-12 294-352
HMMSmart SM00360 RNA 4.1e-10 293-364
ProfileScan PS50102 RRM 13.140 292-375
IPR002075 Nuclear transport factor 2
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006810 transport    
HMMPfam PF02136 NTF2 4.4e-29 13-129
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 2.9e-13 282-382
IPR018222 Nuclear transport factor 2, Eukaryote
ProfileScan PS50177 NTF2_DOMAIN 33.309 13-129
no_ID  
Gene3D G3DSA:3.10.450.50 no description 3.2e-37 8-132
HMMPanther PTHR10693 RAS 2.1e-112 7-463
HMMPanther PTHR10693:SF8 NUCLEAR 2.1e-112 7-463
Seg seg seg NA 50-58
204-220
390-413
superfamily SSF54427 NTF2-like 4e-35 5-130
superfamily SSF54928 RNA-binding 5.8e-17 294-400
Wolf-PSORT
Lj3g3v3261490.1	nucl 7, cyto 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3261490.1