Miyakogusa Predicted Gene

Lj3g3v3247340.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M6I4_SOYBN 1155 74.1 79.9 (tr|I1M6I4) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G13080.2 867 59.0 70.3 | Symbols: ATMRP3, MRP3, ABCC3 | multidrug resistance-associated protein 3 | chr3:4196019-4201250 REVERSE LENGTH=1489
Medicago Medtr5g094830.1 1100 70.6 76.6 | multidrug resistance protein ABC transporter family protein | HC | chr5:41454197-41447535 | 20130731
Soybean Glyma14g01900.1 1155 74.1 79.9  
LJGI gnl|LJGI|FS323316 1405 99.4 99.4 similar to UniRef100_A7Q943 Cluster: Chromosome chr19 scaffold_66, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_66, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3247340.1 length: 780 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 1.2e-27 302-567
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 3.2e-15 656-766
ProfileScan PS50893 ABC_TRANSPORTER_2 10.818 614-780
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 1.1e-34 286-598
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 739-753
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 33.982 300-580
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.2e-36 576-780
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 1.9e-24 294-593
Gene3D G3DSA:3.40.50.300 no description 8.5e-49 612-779
HMMPanther PTHR24223 FAMILY 0 66-779
HMMPanther PTHR24223:SF106GTP BINDING 0 66-779
Seg seg seg NA 12-26
74-86
281-291
300-312
438-450
Wolf-PSORT
Lj3g3v3247340.1	plas 8, E.R. 3, chlo 1, cyto 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3247340.1