Miyakogusa Predicted Gene
- Lj3g3v3241060.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NCH4_SOYBN |
588 |
60.5 |
69.5 |
(tr|I1NCH4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G46260.1 |
546 |
65.6 |
78.0 |
| Symbols: | BTB/POZ/Kelch-associated protein | chr2:18996111-18998463 FORWARD LENGTH=561 |
| Medicago |
Medtr8g028190.1 |
583 |
59.2 |
68.4 |
| BTB/POZ domain protein POB1 | HC | chr8:10528673-10524289 | 20130731 |
| Soybean |
Glyma19g44170.1 |
588 |
60.5 |
69.5 |
|
| LJGI |
gnl|LJGI|TC78370 |
246 |
79.7 |
79.7 |
similar to UniRef100_O82343 Cluster: Expressed protein; n=1; Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis thaliana (Mouse-ear cress), partial (43%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3241060.1 |
length: 466 aa. |
| IPR000210 |
BTB/POZ-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMSmart |
SM00225 |
Broad-Complex, |
6.2e-08 |
22-152 |
| ProfileScan |
PS50097 |
BTB |
9.289 |
52-121 |
| IPR011333 |
BTB/POZ fold |
| Gene3D |
G3DSA:3.30.710.10 |
no description |
9e-15 |
65-149 |
| superfamily |
SSF54695 |
POZ |
3.6e-09 |
24-150 |
| IPR011705 |
BTB/Kelch-associated |
| HMMPfam |
PF07707 |
BACK |
8.9e-10 |
176-267 |
| HMMSmart |
SM00875 |
BTB |
1.6e-10 |
167-269 |
| IPR013069 |
BTB/POZ |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00651 |
BTB |
3.7e-09 |
66-149 |
| no_ID |
|
| HMMPanther |
PTHR24412 |
FAMILY |
6e-125 |
24-349 |
| HMMPanther |
PTHR24412:SF93 |
SUBFAMILY |
6e-125 |
24-349 |
- Wolf-PSORT
Lj3g3v3241060.1 cyto 5, E.R. 4.5, E.R._vacu 3.5, nucl 2, vacu 1.5, nucl_plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3241060.1 |
|