Miyakogusa Predicted Gene

Lj3g3v3241040.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LJV4_SOYBN 470 90.3 92.3 (tr|I1LJV4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G63530.2 188 41.3 57.1 | Symbols: BB, BB2 | RING/U-box superfamily protein | chr3:23456407-23457787 REVERSE LENGTH=248
Medicago Medtr4g065670.1 454 86.7 90.3 | E3 ubiquitin ligase BIG brother-like protein | HC | chr4:24500958-24495700 | 20130731
Soybean Glyma11g14110.2 470 90.3 92.3  
LJGI gnl|LJGI|TC58281 1465 99.7 99.7 similar to UniRef100_A7NZS6 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (62%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3241040.1 length: 248 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 6.9e-14 195-238
HMMSmart SM00184 Ring 1.4e-05 196-236
ProfileScan PS50089 ZF_RING_2 11.102 196-236
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 8.3e-15 191-240
no_ID  
HMMPanther PTHR14155 RING 1.1e-71 134-243
HMMPanther PTHR14155:SF16 SUBFAMILY 1.1e-71 134-243
superfamily SSF57850 RING/U-box 9.4e-16 171-243
Wolf-PSORT
Lj3g3v3241040.1	nucl 10, chlo 2, extr 1, vacu 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3241040.1