Miyakogusa Predicted Gene

Lj3g3v3235480.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LT27_SOYBN 119 68.3 81.7 (tr|K7LT27) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G15630.1 100 62.5 75.0 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:6814521-6816404 FORWARD LENGTH=627
Medicago Medtr4g068360.1 106 61.7 77.8 | PPR containing plant-like protein | HC | chr4:25633167-25630902 | 20130731
Soybean Glyma12g05220.1 117 69.1 81.5  
LJGI gnl|LJGI|TC76680 61.9 89.3 89.3 homologue to UniRef100_A7NYU6 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3235480.1 length: 111 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.19 1-16
HMMPfam PF13041 PPR_2 1.2e-13 18-67
HMMTigr TIGR00756 PPR: 1.5e-09 2-19
21-54
ProfileScan PS51375 PPR 8.057 1-18
19-53
54-84
no_ID  
HMMPanther PTHR24015 FAMILY 3.1e-24 1-82
Wolf-PSORT
Lj3g3v3235480.1	mito 6, cyto 4, chlo 1, nucl 1, extr 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3235480.1