Miyakogusa Predicted Gene

Lj3g3v3213280.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LQN8_SOYBN 1231 77.2 82.5 (tr|I1LQN8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G07510.1 1098 76.3 83.9 | Symbols: ftsh10 | FTSH protease 10 | chr1:2305689-2309380 FORWARD LENGTH=813
Medicago Medtr4g064350.1 1185 75.2 80.2 | ATP-dependent zinc metalloprotease FTSH protein | HC | chr4:24000010-24006140 | 20130731
Soybean Glyma12g06530.1 1231 77.2 82.5  
LJGI gnl|LJGI|TC82560 2050 98.5 98.5 homologue to UniRef100_A7NYX4 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3213280.1 length: 805 aa.
IPR000642 Peptidase M41
method AccNumber shortName E-value location
Molecular Function GO:0004222 metalloendopeptidase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006508 proteolysis    
HMMPfam PF01434 Peptidase_M41 2.1e-71 558-760
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 7e-21 358-498
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 7.6e-41 363-495
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 466-484
IPR005936 Peptidase, FtsH
Molecular Function GO:0004222 metalloendopeptidase activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0030163 protein catabolic process    
HAMAP MF_01458 FtsH 32.316 12-787
HMMTigr TIGR01241 FtsH_fam: 2.5e-201 262-762
IPR011546 Peptidase M41, FtsH extracellular
Molecular Function GO:0004222 metalloendopeptidase activity    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008270 zinc ion binding    
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF06480 FtsH_ext 1.3e-11 142-248
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.7e-70 315-570
no_ID  
Gene3D G3DSA:1.10.8.60 no description 9.5e-24 505-572
Gene3D G3DSA:3.40.50.300 no description 2.1e-58 322-504
HMMPanther PTHR23076 METALLOPROTEASE 0 98-787
HMMPanther PTHR23076:SF11 MITOCHONDRIAL 0 98-787
Seg seg seg NA 4-17
48-68
273-280
283-308
429-442
superfamily SSF140990 FtsH 7.9e-60 579-771
Wolf-PSORT
Lj3g3v3213280.1	chlo 10, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3213280.1