Miyakogusa Predicted Gene
- Lj3g3v3213220.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JSN5_MEDTR |
410 |
86.4 |
89.9 |
(tr|G7JSN5) Nudix hydrolase OS=Medicago truncatula GN=MTR_4g062130 PE=4 SV=1 |
| TAIR_pep |
AT3G46200.1 |
315 |
65.0 |
79.5 |
| Symbols: aTNUDT9, NUDT9 | nudix hydrolase homolog 9 | chr3:16969283-16971017 FORWARD LENGTH=311 |
| Medicago |
Medtr4g062130.1 |
410 |
86.4 |
89.9 |
| nudix hydrolase-like protein | HC | chr4:23053591-23049503 | 20130731 |
| Soybean |
Glyma12g08000.1 |
408 |
84.8 |
90.0 |
|
| LJGI |
gnl|LJGI|TC59448 |
1199 |
97.2 |
97.2 |
similar to UniRef100_A7NZ83 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (91%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3213220.3 |
length: 249 aa. |
| IPR000086 |
NUDIX hydrolase domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| HMMPfam |
PF00293 |
NUDIX |
2e-06 |
85-164 |
| ProfileScan |
PS51462 |
NUDIX |
12.088 |
79-244 |
| IPR015797 |
NUDIX hydrolase domain-like |
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| Gene3D |
G3DSA:3.90.79.10 |
no description |
2e-10 |
83-225 |
| superfamily |
SSF55811 |
Nudix |
1.9e-10 |
81-226 |
| no_ID |
|
| HMMPanther |
PTHR31835 |
FAMILY |
2.3e-30 |
33-203 |
| HMMPanther |
PTHR31835:SF0 |
SUBFAMILY |
2.3e-30 |
33-203 |
- Wolf-PSORT
Lj3g3v3213220.3 nucl 8, mito 2, cysk 2, chlo 1, pero 1, cyto_mito 1, cysk_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3213220.3 |
|