Miyakogusa Predicted Gene

Lj3g3v3201070.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1LQP9_SOYBN 462 76.9 87.5 (tr|I1LQP9) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT5G59400.1 309 61.1 73.0 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 97 Blast hits to 97 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:23957756-23959518 FORWARD LENGTH=299

Medicago Medtr2g097230.1 379 63.6 76.9 | PGR5-like protein 1A, putative | HC | chr2:41516368-41519630 | 20130731

Soybean Glyma12g06710.1 463 77.4 87.8

LJGI gnl|LJGI|TC71102 1614 98.7 98.7 similar to UniRef100_A7NYY6 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (65%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v3201070.1 length: 284 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 159-173

Wolf-PSORT

Lj3g3v3201070.1 chlo 7.5, chlo_mito 4.5, nucl 3, cyto 1, plas 1, vacu 1, cyto_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v3201070.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1LQP9_SOYBN	462	76.9	87.5	(tr\|I1LQP9) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT5G59400.1	309	61.1	73.0	\| Symbols: \| FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PGR5-like B (TAIR:AT4G11960.1); Has 97 Blast hits to 97 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr5:23957756-23959518 FORWARD LENGTH=299
Medicago	Medtr2g097230.1	379	63.6	76.9	\| PGR5-like protein 1A, putative \| HC \| chr2:41516368-41519630 \| 20130731
Soybean	Glyma12g06710.1	463	77.4	87.8
LJGI	gnl\|LJGI\|TC71102	1614	98.7	98.7	similar to UniRef100_A7NYY6 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (65%)

no_ID
Lj3g3v3201070.1				length: 284 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	159-173