Miyakogusa Predicted Gene
- Lj3g3v3200810.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B8Y622_9FABA |
337 |
98.2 |
100.0 |
(tr|B8Y622) Actin OS=Caragana korshinskii GN=ACT1 PE=2 SV=1 |
| TAIR_pep |
AT5G09810.1 |
327 |
93.4 |
99.4 |
| Symbols: ACT7 | actin 7 | chr5:3052809-3054220 FORWARD LENGTH=377 |
| Medicago |
Medtr0015s0130.1 |
334 |
97.0 |
100.0 |
| actin-97 | HC | scaffold0015:65972-69540 | 20130731 |
| Soybean |
Glyma11g14880.1 |
334 |
98.2 |
99.4 |
|
| LJGI |
gnl|LJGI|TC67191 |
690 |
99.7 |
99.7 |
homologue to UniRef100_Q9M729 Cluster: Actin; n=1; Vigna radiata var. radiata|Rep: Actin - Phaseolus aureus (Mung bean) (Vigna radiata), partial (37%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3200810.1 |
length: 170 aa. |
| IPR004000 |
Actin-related protein |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR11937 |
ACTIN |
2.1e-124 |
1-166 |
| HMMPfam |
PF00022 |
Actin |
1.5e-63 |
6-166 |
| HMMSmart |
SM00268 |
Actin |
3e-10 |
1-168 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.420.40 |
no description |
4.8e-36 |
83-159 |
| Gene3D |
G3DSA:3.90.640.10 |
no description |
2.9e-35 |
1-78 |
| HMMPanther |
PTHR11937:SF78 |
ATARP5 |
2.1e-124 |
1-166 |
| superfamily |
SSF53067 |
Actin-like |
5.6e-65 |
1-165 |
- Wolf-PSORT
Lj3g3v3200810.1 chlo 6, nucl 3, cyto 3, cyto_nucl 3, chlo_mito 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3200810.1 |
|