Miyakogusa Predicted Gene
- Lj3g3v3189650.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KV76_SOYBN |
641 |
83.3 |
89.3 |
(tr|K7KV76) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G64600.1 |
476 |
69.5 |
81.8 |
| Symbols: | O-fucosyltransferase family protein | chr5:25825178-25827931 FORWARD LENGTH=522 |
| Medicago |
Medtr3g096020.1 |
614 |
81.0 |
87.0 |
| O-fucosyltransferase family protein | HC | chr3:43884220-43877937 | 20130731 |
| Soybean |
Glyma04g39170.1 |
616 |
79.9 |
85.2 |
|
| LJGI |
gnl|LJGI|TC69922 |
763 |
99.7 |
99.7 |
similar to UniRef100_A7QB61 Cluster: Chromosome chr4 scaffold_73, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_73, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3189650.1 |
length: 377 aa. |
| IPR019378 |
GDP-fucose protein O-fucosyltransferase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF10250 |
O-FucT |
1.3e-67 |
109-369 |
| no_ID |
|
| HMMPanther |
PTHR31741 |
FAMILY |
1.2e-154 |
23-368 |
| HMMPanther |
PTHR31741:SF0 |
SUBFAMILY |
1.2e-154 |
23-368 |
| Seg |
seg |
seg |
NA |
29-41 |
- Wolf-PSORT
Lj3g3v3189650.1 chlo 6, mito 4, cyto 1, plas 1, E.R. 1, golg 1, golg_plas 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3189650.1 |
|