Miyakogusa Predicted Gene

Lj3g3v3188600.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T1E0_LOTJA 413 86.1 86.1 (tr|I3T1E0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT5G59350.1 107 36.1 47.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:23941132-23941995 FORWARD LENGTH=287

Medicago Medtr2g096720.1 215 46.2 54.8 | transmembrane protein, putative | HC | chr2:41307570-41309267 | 20130731

Soybean Glyma15g04440.1 245 50.2 58.2

LJGI gnl|LJGI|TC65072 1758 99.8 99.8 similar to UniRef100_A7NZ33 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v3188600.1 length: 297 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 18-29
36-43
121-132
268-284

Wolf-PSORT

Lj3g3v3188600.1 chlo 9, extr 3, nucl 1, vacu 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v3188600.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T1E0_LOTJA	413	86.1	86.1	(tr\|I3T1E0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT5G59350.1	107	36.1	47.1	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). \| chr5:23941132-23941995 FORWARD LENGTH=287
Medicago	Medtr2g096720.1	215	46.2	54.8	\| transmembrane protein, putative \| HC \| chr2:41307570-41309267 \| 20130731
Soybean	Glyma15g04440.1	245	50.2	58.2
LJGI	gnl\|LJGI\|TC65072	1758	99.8	99.8	similar to UniRef100_A7NZ33 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)

no_ID
Lj3g3v3188600.1				length: 297 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	18-29 36-43 121-132 268-284