Miyakogusa Predicted Gene

Lj3g3v3188400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I4A4_MEDTR 880 70.9 77.9 (tr|G7I4A4) Pectinesterase OS=Medicago truncatula GN=MTR_1g008140 PE=3 SV=1
TAIR_pep AT5G53370.1 705 62.9 72.8 | Symbols: ATPMEPCRF, PMEPCRF | pectin methylesterase PCR fragment F | chr5:21649683-21651530 REVERSE LENGTH=587
Medicago Medtr1g008140.1 880 70.9 77.9 | pectinesterase/pectinesterase inhibitor | HC | chr1:748436-744520 | 20130731
Soybean Glyma06g13400.1 763 62.6 71.5  
LJGI gnl|LJGI|TC78711 1302 97.0 97.0 similar to UniRef100_A0ZNJ9 Cluster: Pectin methylesterase 1; n=1; Pyrus communis|Rep: Pectin methylesterase 1 - Pyrus communis (Pear), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3188400.1 length: 613 aa.
IPR000070 Pectinesterase, catalytic
method AccNumber shortName E-value location
Cellular Component GO:0005618 cell wall    
Molecular Function GO:0030599 pectinesterase activity    
Biological Process GO:0042545 cell wall modification    
HMMPfam PF01095 Pectinesterase 5.3e-145 299-596
IPR006501 Pectinesterase inhibitor
Molecular Function GO:0004857 enzyme inhibitor activity    
Molecular Function GO:0030599 pectinesterase activity    
Gene3D G3DSA:1.20.140.40 no description 3.8e-36 85-245
HMMPfam PF04043 PMEI 2e-32 85-243
HMMSmart SM00856 Plant 4.5e-43 83-243
HMMTigr TIGR01614 PME_inhib: 8.8e-34 76-244
superfamily SSF101148 Plant 6.1e-30 85-250
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 4.8e-111 292-611
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 2e-119 296-609
IPR018040 Pectinesterase, active site
PatternScan PS00503 PECTINESTERASE_2 NA 444-453
no_ID  
HMMPanther PTHR31707 FAMILY 4.6e-261 29-613
HMMPanther PTHR31707:SF0 SUBFAMILY 4.6e-261 29-613
Seg seg seg NA 27-41
42-63
168-180
309-320
379-388
Wolf-PSORT
Lj3g3v3188400.1	nucl 6, cyto 3, cysk_nucl 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3188400.1