Miyakogusa Predicted Gene
- Lj3g3v3188380.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S6E2_LOTJA |
712 |
99.4 |
99.7 |
(tr|I3S6E2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G46440.2 |
627 |
90.0 |
95.6 |
| Symbols: UXS5 | UDP-XYL synthase 5 | chr3:17089268-17091611 REVERSE LENGTH=341 |
| Medicago |
Medtr2g096660.2 |
673 |
93.6 |
95.9 |
| UDP-glucuronic acid decarboxylase | HC | chr2:41272127-41267236 | 20130731 |
| Soybean |
Glyma12g06980.3 |
676 |
94.5 |
96.2 |
|
| LJGI |
gnl|LJGI|TC62109 |
2022 |
99.3 |
99.3 |
homologue to UniRef100_Q9SMJ5 Cluster: DTDP-glucose 4-6-dehydratase; n=1; Cicer arietinum|Rep: DTDP-glucose 4-6-dehydratase - Cicer arietinum (Chickpea) (Garbanzo), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3188380.2 |
length: 346 aa. |
| IPR001509 |
NAD-dependent epimerase/dehydratase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0044237 |
cellular metabolic process |
|
|
| Molecular Function |
GO:0050662 |
coenzyme binding |
|
|
| HMMPfam |
PF01370 |
Epimerase |
9.8e-46 |
35-269 |
| IPR016040 |
NAD(P)-binding domain |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
7.2e-67 |
31-201 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.25.10 |
no description |
8.9e-51 |
202-341 |
| HMMPanther |
PTHR10366 |
NAD |
2.7e-183 |
30-346 |
| HMMPanther |
PTHR10366:SF35 |
DTDP-GLUCOSE |
2.7e-183 |
30-346 |
| superfamily |
SSF51735 |
NAD(P)-binding |
5.9e-85 |
33-337 |
- Wolf-PSORT
Lj3g3v3188380.2 cyto 11, nucl 1, E.R. 1, cysk 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3188380.2 |
|