Miyakogusa Predicted Gene

Lj3g3v3177300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LK48_SOYBN 294 65.2 71.6 (tr|I1LK48) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G59950.1 211 47.5 58.8 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:24140235-24141504 FORWARD LENGTH=244
Medicago Medtr4g063557.3 287 61.1 66.8 | RNA and export factor-binding protein | HC | chr4:23458836-23463583 | 20130731
Soybean Glyma11g15040.2 294 65.2 71.6  
LJGI gnl|LJGI|TC74183 710 100.0 100.0 similar to UniRef100_Q68VB5 Cluster: ALY protein; n=1; Nicotiana benthamiana|Rep: ALY protein - Nicotiana benthamiana, partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3177300.1 length: 244 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 2.3e-13 89-157
HMMSmart SM00360 RNA 1e-16 88-160
ProfileScan PS50102 RRM 15.426 87-164
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 2.5e-18 202-203
no_ID  
HMMPanther PTHR19965 RNA 3.2e-74 1-242
HMMPanther PTHR19965:SF8 RNA 3.2e-74 1-242
Seg seg seg NA 189-220
superfamily SSF54928 RNA-binding 2.1e-22 52-194
Wolf-PSORT
Lj3g3v3177300.1	mito 7, nucl 3, cyto 2, nucl_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3177300.1