Miyakogusa Predicted Gene
- Lj3g3v3166240.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A5BFH9_VITVI |
88.6 |
97.4 |
100.0 |
(tr|A5BFH9) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033038 PE=4 SV=1 |
| TAIR_pep |
AT2G22310.1 |
85.5 |
92.7 |
92.7 |
| Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4 | chr2:9476733-9478825 REVERSE LENGTH=365 |
| Medicago |
Medtr8g090190.1 |
86.7 |
95.1 |
95.1 |
| ubiquitin carboxyl-terminal hydrolase | HC | chr8:37821953-37828258 | 20130731 |
| Soybean |
Glyma18g02020.1 |
87.0 |
95.1 |
95.1 |
|
| LJGI |
gnl|LJGI|TC78958 |
234 |
100.0 |
100.0 |
homologue to UniRef100_A7R3S3 Cluster: Ubiquitin carboxyl-terminal hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin carboxyl-terminal hydrolase - Vitis vinifera (Grape), partial (98%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3166240.1 |
length: 71 aa. |
| IPR001394 |
Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004221 |
ubiquitin thiolesterase activity |
|
|
| Biological Process |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
|
|
| HMMPfam |
PF00443 |
UCH |
1.4e-08 |
21-46 |
| IPR018200 |
Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site |
| Molecular Function |
GO:0004221 |
ubiquitin thiolesterase activity |
|
|
| Biological Process |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
|
|
| PatternScan |
PS00972 |
UCH_2_1 |
NA |
24-39 |
| no_ID |
|
| superfamily |
SSF54001 |
Cysteine |
4.7e-09 |
17-41 |
- Wolf-PSORT
Lj3g3v3166240.1 chlo 3, nucl 3, cyto 2, plas 2, E.R. 2, chlo_mito 2, E.R._plas 2, cyto_E.R. 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3166240.1 |
|