Miyakogusa Predicted Gene
- Lj3g3v3165180.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IHM0_MEDTR |
504 |
61.5 |
76.5 |
(tr|G7IHM0) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_2g096450 PE=4 SV=1 |
| TAIR_pep |
AT3G55350.1 |
376 |
51.5 |
69.3 |
| Symbols: | PIF / Ping-Pong family of plant transposases | chr3:20518518-20520690 FORWARD LENGTH=406 |
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
Glyma20g23150.2 |
388 |
54.8 |
68.1 |
|
| LJGI |
gnl|LJGI|GO036207 |
220 |
87.6 |
87.6 |
similar to UniRef100_A2Q269 Cluster: Trp repressor/replication initiator; n=1; Medicago truncatula|Rep: Trp repressor/replication initiator - Medicago truncatula (Barrel medic), partial (11%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v3165180.1 |
length: 388 aa. |
| IPR026103 |
Harbinger transposase-derived nuclease |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR22930 |
UNCHARACTERIZED |
1.1e-70 |
50-361 |
| no_ID |
|
| HMMPfam |
PF13359 |
DDE_4 |
9.3e-33 |
166-334 |
- Wolf-PSORT
Lj3g3v3165180.1 plas 4, nucl 3, cyto_plas 3, chlo 2, cyto 2, cysk_plas 2, E.R._plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v3165180.1 |
|