Miyakogusa Predicted Gene

Lj3g3v3131850.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J445_MEDTR 838 67.1 75.3 (tr|G7J445) Inter-alpha-trypsin inhibitor heavy chain H4 OS=Medicago truncatula GN=MTR_3g111210 PE=4 SV=1
TAIR_pep AT5G49665.1 588 52.1 64.1 | Symbols: | Zinc finger (C3HC4-type RING finger) family protein | chr5:20167119-20169420 REVERSE LENGTH=740
Medicago Medtr3g111210.1 843 67.2 75.3 | zinc finger (C3HC4-type RING finger) family protein | HC | chr3:51968411-51966024 | 20130731
Soybean Glyma14g36400.1 580 52.0 61.5  
LJGI gnl|LJGI|TC69020 1695 100.0 100.0 similar to UniRef100_A7R324 Cluster: Chromosome chr7 scaffold_476, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_476, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3131850.1 length: 673 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 5.1e-09 27-74
HMMSmart SM00184 Ring 4.7e-06 28-72
ProfileScan PS50089 ZF_RING_2 11.398 28-73
IPR002035 von Willebrand factor, type A
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:3.40.50.410 no description 3.4e-18 254-409
HMMPfam PF00092 VWA 1.2e-16 259-406
HMMSmart SM00327 von 5.2e-16 257-446
ProfileScan PS50234 VWFA 13.405 259-407
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 5.9e-09 24-81
no_ID  
HMMPanther PTHR11210 RING 2.3e-110 19-351
HMMPanther PTHR11210:SF4 ZINC 2.3e-110 19-351
Seg seg seg NA 163-175
237-247
477-488
563-575
600-620
superfamily SSF53300 vWA-like 4.1e-22 256-458
superfamily SSF57850 RING/U-box 9.9e-12 23-85
Wolf-PSORT
Lj3g3v3131850.1	chlo 5, pero 3, chlo_mito 3, nucl 2, cyto_pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3131850.1