Miyakogusa Predicted Gene

Lj3g3v3119760.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N0N9_SOYBN 270 37.1 51.4 (tr|K7N0N9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G39710.1 237 33.9 48.3 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 274 35.6 48.8 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma20g01300.1 276 38.8 55.0  
LJGI gnl|LJGI|TC81373 1314 100.0 100.0 similar to UniRef100_A7PSR1 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3119760.1 length: 445 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 4.6e-06 89-118
HMMPfam PF13041 PPR_2 8.4e-12 120-169
201-235
266-305
336-385
HMMTigr TIGR00756 PPR: 1.7e-06 89-121
123-157
159-192
224-260
262-294
297-328
339-373
ProfileScan PS51375 PPR 7.180 86-120
121-155
156-190
222-258
259-293
294-328
337-371
372-402
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.9e-05 224-359
no_ID  
HMMPanther PTHR24015 FAMILY 8.2e-92 33-395
HMMPanther PTHR24015:SF0 SUBFAMILY 8.2e-92 33-395
Seg seg seg NA 139-147
Wolf-PSORT
Lj3g3v3119760.1	chlo 10, mito 2.5, cyto_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3119760.1