Miyakogusa Predicted Gene

Lj3g3v3117660.4
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1LR23_SOYBN 1541 77.9 83.7 (tr|I1LR23) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G45780.2 1278 67.2 76.6 | Symbols: PHOT1, NPH1, JK224, RPT1 | phototropin 1 | chr3:16818557-16823960 FORWARD LENGTH=996
Medicago Medtr4g061610.1 1421 75.2 81.5 | nonphototropic hypocotyl protein | HC | chr4:22792573-22803752 | 20130731
Soybean Glyma12g07890.2 1541 77.9 83.7  
LJGI gnl|LJGI|BP043839 1043 99.8 99.8 similar to UniRef100_Q5DW44 Cluster: Phototropin; n=1; Phaseolus vulgaris|Rep: Phototropin - Phaseolus vulgaris (Kidney bean) (French bean), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3117660.4 length: 961 aa.
IPR000014 PAS domain
method AccNumber shortName E-value location
Molecular Function GO:0004871 signal transducer activity    
Biological Process GO:0007165 signal transduction    
HMMSmart SM00091 PAS 0.11 151-220
433-502
HMMTigr TIGR00229 sensory_box: 8.3e-11 176-270
456-546
ProfileScan PS50112 PAS 11.359 149-220
431-504
superfamily SSF55785 PYP-like 3.1e-27 162-265
441-546
IPR000700 PAS-associated, C-terminal
Molecular Function GO:0000155 phosphorelay sensor kinase activity    
Biological Process GO:0000160 phosphorelay signal transduction system    
ProfileScan PS50113 PAC 12.182 223-277
505-559
IPR000719 Protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF00069 Pkinase 9.5e-61 635-918
ProfileScan PS50011 PROTEIN_KINASE_DOM 44.230 632-918
IPR001610 PAC motif
HMMSmart SM00086 Motif 2.9e-08 226-268
508-550
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 7.1e-90 632-918
IPR008271 Serine/threonine-protein kinase, active site
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
PatternScan PS00108 PROTEIN_KINASE_ST NA 752-764
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 1.3e-79 607-945
IPR017441 Protein kinase, ATP binding site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00107 PROTEIN_KINASE_ATP NA 638-661
IPR020635 Tyrosine-protein kinase, catalytic domain
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00219 Tyrosine 1.1e-06 632-912
no_ID  
Gene3D G3DSA:1.10.510.10 no description 1.3e-58 715-948
Gene3D G3DSA:3.30.200.20 no description 2.2e-23 626-714
Gene3D G3DSA:3.30.450.20 no description 6.4e-32 163-267
445-548
HMMPanther PTHR24351 RIBOSOMAL 9.1e-299 407-933
HMMPanther PTHR24351:SF37 SERINE/THREONINE-PROTEIN 9.1e-299 407-933
HMMPfam PF13426 PAS_9 2.6e-26 170-266
446-546
Seg seg seg NA 112-123
131-142
399-418
Wolf-PSORT
Lj3g3v3117660.4	nucl 10, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3117660.4