Miyakogusa Predicted Gene

Lj3g3v3097580.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LPU3_SOYBN 608 85.1 90.1 (tr|K7LPU3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G60170.2 476 72.8 82.7 | Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr5:24228178-24232394 FORWARD LENGTH=987
Medicago Medtr4g061180.2 575 81.1 88.6 | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr4:22596011-22605283 | 20130731
Soybean Glyma11g15670.1 584 82.9 87.6  
LJGI gnl|LJGI|TC73436 1245 98.9 98.9 similar to UniRef100_A7NZC1 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3097580.2 length: 333 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00360 RNA 0.01 110-191
ProfileScan PS50102 RRM 10.650 109-195
IPR001841 Zinc finger, RING-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 9.671 9-57
IPR003954 RNA recognition motif domain, eukaryote
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00361 RNA 9.5e-11 110-191
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1.6e-10 108-195
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.8e-13 1-65
no_ID  
HMMPanther PTHR12603 CCR4-NOT 1.8e-131 1-307
HMMPanther PTHR12603:SF0 SUBFAMILY 1.8e-131 1-307
HMMPfam PF13893 RRM_5 2.3e-07 129-192
Seg seg seg NA 83-94
superfamily SSF54928 RNA-binding 1.5e-15 101-191
superfamily SSF57850 RING/U-box 1.5e-13 1-78
Wolf-PSORT
Lj3g3v3097580.2	nucl 11, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3097580.2