Miyakogusa Predicted Gene

Lj3g3v3087290.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7JRI2_MEDTR 1068 46.4 58.8 (tr|G7JRI2) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g061110 PE=4 SV=1

TAIR_pep AT5G60150.1 75.9 44.3 56.8 | Symbols: | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:24218211-24223245 FORWARD LENGTH=1195

Medicago Medtr4g061110.1 1067 46.4 58.9 | hypothetical protein | HC | chr4:22559116-22566720 | 20130731

Soybean Glyma12g07760.1 55.5 68.2 72.7

LJGI gnl|LJGI|FS321365 595 100.0 100.0 similar to UniRef100_A7NZC9 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v3087290.2 length: 1414 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 825-850

Seg seg seg NA 249-265
718-734
1352-1365

Wolf-PSORT

Lj3g3v3087290.2 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v3087290.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7JRI2_MEDTR	1068	46.4	58.8	(tr\|G7JRI2) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_4g061110 PE=4 SV=1
TAIR_pep	AT5G60150.1	75.9	44.3	56.8	\| Symbols: \| unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). \| chr5:24218211-24223245 FORWARD LENGTH=1195
Medicago	Medtr4g061110.1	1067	46.4	58.9	\| hypothetical protein \| HC \| chr4:22559116-22566720 \| 20130731
Soybean	Glyma12g07760.1	55.5	68.2	72.7
LJGI	gnl\|LJGI\|FS321365	595	100.0	100.0	similar to UniRef100_A7NZC9 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)

no_ID
Lj3g3v3087290.2				length: 1414 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	825-850
Seg	seg	seg	NA	249-265 718-734 1352-1365