Miyakogusa Predicted Gene

Lj3g3v3085530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LL54_SOYBN 1655 94.3 97.2 (tr|I1LL54) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G60690.1 1446 82.1 91.5 | Symbols: REV, IFL, IFL1 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr5:24397734-24401933 FORWARD LENGTH=842
Medicago Medtr4g058970.1 1607 92.3 96.3 | class III homeodomain leucine zipper protein | HC | chr4:21744620-21738548 | 20130731
Soybean Glyma11g20520.1 1655 94.3 97.2  
LJGI gnl|LJGI|TC71311 428 88.3 88.3 similar to UniRef100_Q5D1M6 Cluster: Class III HD-Zip protein 1; n=1; Populus trichocarpa|Rep: Class III HD-Zip protein 1 - Populus trichocarpa (Western balsam poplar) (Populus balsamiferasubsp. trichocarpa), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3085530.1 length: 843 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 9.2e-16 27-84
HMMSmart SM00389 Homeodomain 2.8e-15 23-89
ProfileScan PS50071 HOMEOBOX_2 15.127 29-85
IPR002913 START domain
HMMPfam PF01852 START 1.1e-46 165-372
HMMSmart SM00234 in 1.3e-40 164-374
ProfileScan PS50848 START 27.103 155-383
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.5e-17 28-84
superfamily SSF46689 Homeodomain-like 3.6e-16 14-96
IPR013978 MEKHLA
HMMPfam PF08670 MEKHLA 5.1e-63 694-843
IPR023393 START-like domain
Gene3D G3DSA:3.30.530.20 no description 4.6e-19 164-364
no_ID  
Coil coil coiled-coil NA 91-123
HMMPanther PTHR24326 FAMILY 6.1e-88 9-297
HMMPanther PTHR24326:SF63 SUBFAMILY 6.1e-88 9-297
superfamily SSF55961 Bet 1.7e-36 163-376
Wolf-PSORT
Lj3g3v3085530.1	chlo 9.5, chlo_mito 5.5, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3085530.1