Miyakogusa Predicted Gene

Lj3g3v3085460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LR43_SOYBN 1083 77.4 83.5 (tr|I1LR43) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G28350.1 720 56.4 67.3 | Symbols: ARF10 | auxin response factor 10 | chr2:12114331-12116665 FORWARD LENGTH=693
Medicago Medtr4g058930.1 1001 75.8 81.8 | auxin response factor, putative | HC | chr4:21714903-21719127 | 20130731
Soybean Glyma12g08110.1 1083 77.4 83.5  
LJGI gnl|LJGI|TC78692 1558 99.7 99.7 similar to UniRef100_A7NZK3 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3085460.1 length: 683 aa.
IPR003311 AUX/IAA protein
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02309 AUX_IAA 4.8e-06 580-662
IPR003340 B3 DNA binding domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 1.2e-22 106-207
HMMSmart SM01019 B3 4.1e-22 106-208
ProfileScan PS50863 B3 13.140 106-208
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 2.1e-34 278-361
IPR011525 Aux/IAA-ARF-dimerisation
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 21.341 581-659
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 3.7e-36 99-209
superfamily SSF101936 DNA-binding 1.1e-29 89-207
no_ID  
HMMPanther PTHR31384 FAMILY 1.4e-185 4-461
Seg seg seg NA 86-98
210-235
Wolf-PSORT
Lj3g3v3085460.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3085460.1