| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1LTL9_SOYBN | 1514 | 91.2 | 95.8 | (tr|I1LTL9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT5G03340.1 | 1471 | 89.1 | 94.8 | | Symbols: | ATPase, AAA-type, CDC48 protein | chr5:810091-813133 REVERSE LENGTH=810 |
| Medicago | Medtr1g063380.1 | 1467 | 88.5 | 93.9 | | ATPase, AAA-type, CDC48 protein | HC | chr1:27975315-27979980 | 20130731 |
| Soybean | Glyma12g30060.1 | 1514 | 91.2 | 95.8 | |
| LJGI | gnl|LJGI|BP041402 | 502 | 100.0 | 100.0 | homologue to UniRef100_P54774 Cluster: Cell division cycle protein 48 homolog; n=2; Glycine max|Rep: Cell division cycle protein 48 homolog - Glycine max (Soybean), partial (10%) |
| Lj3g3v3067920.1 | length: 810 aa. | |||
| IPR003338 | CDC48, N-terminal subdomain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF02359 | CDC48_N | 2.3e-22 | 32-114 |
| HMMSmart | SM01073 | Cell | 4.1e-30 | 32-115 |
| IPR003593 | AAA+ ATPase domain | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Molecular Function | GO:0017111 | nucleoside-triphosphatase activity | ||
| HMMSmart | SM00382 | ATPases | 2e-21 | 242-378 515-654 |
| IPR003959 | ATPase, AAA-type, core | |||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMPfam | PF00004 | AAA | 9.1e-46 | 246-375 519-652 |
| IPR003960 | ATPase, AAA-type, conserved site | |||
| Molecular Function | GO:0005524 | ATP binding | ||
| PatternScan | PS00674 | AAA | NA | 346-364 622-640 |
| IPR004201 | CDC48, domain 2 | |||
| HMMPfam | PF02933 | CDC48_2 | 5e-10 | 134-196 |
| HMMSmart | SM01072 | Cell | 2.6e-15 | 132-197 |
| IPR005938 | ATPase, AAA-type, CDC48 | |||
| Molecular Function | GO:0016787 | hydrolase activity | ||
| HMMPanther | PTHR23077:SF18 | CELL | 0 | 16-794 |
| HMMTigr | TIGR01243 | CDC48: | 5.3e-262 | 38-771 |
| IPR009010 | Aspartate decarboxylase-like domain | |||
| Gene3D | G3DSA:2.40.40.20 | no description | 3.5e-48 | 12-114 |
| superfamily | SSF50692 | ADC-like | 9e-30 | 28-113 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
| superfamily | SSF52540 | P-loop | 4.4e-70 | 476-771 206-463 |
| no_ID | ||||
| Gene3D | G3DSA:1.10.8.60 | no description | 8.2e-18 | 661-755 |
| Gene3D | G3DSA:3.10.330.10 | no description | 3.8e-42 | 115-205 |
| Gene3D | G3DSA:3.40.50.300 | no description | 4.5e-65 | 208-482 483-660 |
| HMMPanther | PTHR23077 | AAA-FAMILY | 0 | 16-794 |
| Seg | seg | seg | NA | 7-10 |
| superfamily | SSF54585 | Cdc48 | 1.7e-34 | 114-206 |
Lj3g3v3067920.1 cyto 7, nucl 3, chlo 2, cysk 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj3g3v3067920.1 |