Miyakogusa Predicted Gene

Lj3g3v3056700.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL H2BER4_SOYBN 615 89.2 95.7 (tr|H2BER4) 4-coumarate:CoA ligase OS=Glycine max GN=4CL PE=2 SV=1
TAIR_pep AT4G05160.1 530 75.0 88.6 | Symbols: | AMP-dependent synthetase and ligase family protein | chr4:2664451-2666547 FORWARD LENGTH=544
Medicago Medtr2g095510.1 615 89.2 96.0 | 4-coumarate:CoA ligase-like protein | HC | chr2:40810320-40805529 | 20130731
Soybean Glyma13g39770.1 615 89.2 95.7  
LJGI gnl|LJGI|GO023895 769 100.0 100.0 similar to UniRef100_A7PQS6 Cluster: Chromosome chr6 scaffold_25, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_25, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3056700.1 length: 324 aa.
IPR000873 AMP-dependent synthetase/ligase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00501 AMP-binding 5.1e-74 13-251
IPR025110 Domain of unknown function DUF4009
HMMPfam PF13193 DUF4009 8.1e-09 291-319
no_ID  
Gene3D G3DSA:2.30.38.10 no description 1.1e-29 142-217
Gene3D G3DSA:3.30.300.30 no description 2e-29 223-322
Gene3D G3DSA:3.40.50.980 no description 2e-39 13-132
HMMPanther PTHR24096 FAMILY 1e-165 14-322
HMMPanther PTHR24096:SF16 SUBFAMILY 1e-165 14-322
superfamily SSF56801 Acetyl-CoA 4.3e-113 13-323
Wolf-PSORT
Lj3g3v3056700.1	chlo 4, nucl 2.5, cysk_nucl 2.5, vacu 2, E.R. 2, chlo_mito 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3056700.1