Miyakogusa Predicted Gene

Lj3g3v3033270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SWI0_LOTJA 501 92.2 92.2 (tr|I3SWI0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G22920.1 388 74.1 87.4 | Symbols: | CHY-type/CTCHY-type/RING-type Zinc finger protein | chr5:7665143-7667031 FORWARD LENGTH=291
Medicago Medtr4g057310.1 412 79.9 93.6 | RING finger and CHY zinc finger protein | HC | chr4:20972656-20976575 | 20130731
Soybean Glyma11g19860.1 435 82.8 92.9  
LJGI gnl|LJGI|TC57441 1594 100.0 100.0 similar to UniRef100_A7PQP8 Cluster: Chromosome chr6 scaffold_25, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_25, whole genome shotgun sequence - Vitis vinifera (Grape), partial (93%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3033270.1 length: 268 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 7.6e-10 174-219
HMMSmart SM00184 Ring 5.5e-07 175-217
ProfileScan PS50089 ZF_RING_2 12.209 175-218
IPR004039 Rubredoxin-type fold
Gene3D G3DSA:2.20.28.10 no description 4.6e-07 246-267
IPR008913 Zinc finger, CHY-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF05495 zf-CHY 2.3e-16 39-122
ProfileScan PS51266 ZF_CHY 25.086 32-108
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.6e-11 172-231
IPR017921 Zinc finger, CTCHY-type
ProfileScan PS51270 ZF_CTCHY 33.892 110-174
no_ID  
HMMPanther PTHR21319 RING 2.9e-123 11-268
Seg seg seg NA 9-29
superfamily SSF57850 RING/U-box 1.6e-11 168-239
Wolf-PSORT
Lj3g3v3033270.1	cyto 7, cysk 4, extr 2, cysk_nucl 2, cysk_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3033270.1