Miyakogusa Predicted Gene

Lj3g3v3033250.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C0JP23_LOTJA 572 94.8 94.8 (tr|C0JP23) Putative basic helix-loop-helix protein BHLH20 OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT2G28160.1 235 47.4 63.8 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ATFIT1 | FER-like regulator of iron uptake | chr2:12004713-12005908 FORWARD LENGTH=318
Medicago Medtr4g057270.1 332 60.3 73.6 | transcription factor | HC | chr4:20952448-20950145 | 20130731
Soybean Glyma11g19850.1 312 62.7 72.6  
LJGI gnl|LJGI|GO011352 1394 99.5 99.5 similar to UniRef100_A7PQP7 Cluster: Chromosome chr6 scaffold_25, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_25, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3033250.2 length: 293 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 1.3e-14 136-199
HMMPfam PF00010 HLH 1.6e-07 141-184
HMMSmart SM00353 helix 1.5e-12 140-189
ProfileScan PS50888 BHLH 14.964 134-183
superfamily SSF47459 HLH, 2e-17 132-216
no_ID  
Coil coil coiled-coil NA 180-201
HMMPanther PTHR11514 MYC 1.9e-23 104-266
HMMPanther PTHR11514:SF8 EGL3 1.9e-23 104-266
Seg seg seg NA 102-116
Wolf-PSORT
Lj3g3v3033250.2	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3033250.2