Miyakogusa Predicted Gene

Lj3g3v3031050.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N0N9_SOYBN 344 44.8 61.1 (tr|K7N0N9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G39710.1 312 40.9 59.8 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 332 40.3 56.9 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma07g29110.1 259 36.5 52.6  
LJGI gnl|LJGI|BP042555 735 99.2 99.2  
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3031050.1 length: 465 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0024 161-190
406-435
HMMPfam PF12854 PPR_1 2.6e-09 118-150
HMMPfam PF13041 PPR_2 5.6e-14 52-101
197-246
HMMTigr TIGR00756 PPR: 1e-05 56-89
91-124
126-157
160-193
200-234
235-266
ProfileScan PS51375 PPR 6.051 53-87
18-52
88-122
123-157
158-192
198-232
233-267
281-315
403-437
368-402
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00018 53-221
no_ID  
HMMPanther PTHR24015 FAMILY 2.1e-73 15-436
HMMPanther PTHR24015:SF0 SUBFAMILY 2.1e-73 15-436
Wolf-PSORT
Lj3g3v3031050.1	chlo 10, cyto 2, mito 1, plas 1, cyto_nucl 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3031050.1