Miyakogusa Predicted Gene

Lj3g3v2995970.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JKW4_MEDTR 3410 85.4 91.3 (tr|G7JKW4) DNA polymerase OS=Medicago truncatula GN=MTR_4g054980 PE=3 SV=1
TAIR_pep AT1G08260.1 2918 74.6 84.7 | Symbols: EMB142, EMB2284, POL2A, TIL1, EMB529, ABO4, ESD7 | DNA polymerase epsilon catalytic subunit | chr1:2590944-2606892 FORWARD LENGTH=2161
Medicago Medtr4g054980.1 3460 87.5 93.6 | DNA polymerase epsilon catalytic subunit A | HC | chr4:19992779-19966992 | 20130731
Soybean Glyma12g09220.1 3227 81.5 87.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2995970.2 length: 1897 aa.
IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain
method AccNumber shortName E-value location
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006260 DNA replication    
HMMPfam PF03104 DNA_pol_B_exo1 3.1e-72 74-401
IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006260 DNA replication    
HMMPfam PF00136 DNA_pol_B 5.2e-21 597-1070
IPR006172 DNA-directed DNA polymerase, family B
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006139 nucleobase-containing compound metabolic process    
HMMSmart SM00486 DNA 2.6e-76 240-843
IPR012337 Ribonuclease H-like domain
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 5.5e-81 63-486
IPR013697 DNA polymerase epsilon, catalytic subunit A, C-terminal
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006260 DNA replication    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF08490 DUF1744 1.9e-121 1530-1894
no_ID  
Coil coil coiled-coil NA 566-587
Gene3D G3DSA:3.30.420.10 no description 5.9e-59 243-444
HMMPanther PTHR10670 DNA 0 1-1894
HMMPanther PTHR10670:SF0 DNA 0 1-1894
Seg seg seg NA 3-14
superfamily SSF56672 DNA/RNA 3.6e-95 470-1130
Wolf-PSORT
Lj3g3v2995970.2	nucl 7, cyto 5, chlo 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2995970.2