Miyakogusa Predicted Gene

Lj3g3v2995710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LKT2_SOYBN 820 90.8 94.0 (tr|I1LKT2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G27600.1 790 87.1 92.4 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase family protein | chr2:11781226-11783730 FORWARD LENGTH=435
Medicago Medtr4g053350.1 818 90.6 94.2 | AAA-type ATPase family protein | HC | chr4:19412309-19418075 | 20130731
Soybean Glyma11g19120.1 820 90.8 94.0  
LJGI gnl|LJGI|TC67582 2571 99.8 99.8 homologue to UniRef100_A7R0D5 Cluster: Chromosome chr6 scaffold_305, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_305, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2995710.1 length: 434 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2.6e-19 163-299
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 6.2e-44 168-297
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 269-288
IPR007330 MIT
HMMPfam PF04212 MIT 9.8e-21 7-72
HMMSmart SM00745 Microtubule 3.2e-24 2-79
IPR015415 Vps4 oligomerisation, C-terminal
HMMPfam PF09336 Vps4_C 3.5e-24 366-431
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.2e-60 125-431
no_ID  
Gene3D G3DSA:1.10.8.60 no description 3.8e-11 306-359
Gene3D G3DSA:1.20.58.280 no description 8.6e-27 2-75
Gene3D G3DSA:3.40.50.300 no description 4.9e-67 122-305
HMMPanther PTHR23074 AAA 0 1-434
HMMPanther PTHR23074:SF4 AAA-FAMILY 0 1-434
Seg seg seg NA 92-109
superfamily SSF116846 MIT 1.5e-23 1-101
Wolf-PSORT
Lj3g3v2995710.1	nucl 6, cyto 5, mito 1, plas 1, golg 1, golg_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2995710.1