Miyakogusa Predicted Gene

Lj3g3v2995580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL C6TEB1_SOYBN 456 71.4 76.5 (tr|C6TEB1) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT1G08290.1 327 53.2 60.7 | Symbols: WIP3 | WIP domain protein 3 | chr1:2610680-2613180 REVERSE LENGTH=337
Medicago Medtr1g093095.1 277 72.8 86.1 | C2H2-type zinc finger protein | HC | chr1:41939075-41940250 | 20130731
Soybean Glyma12g09400.1 456 71.4 76.5  
LJGI gnl|LJGI|FS360083 486 100.0 100.0 homologue to UniRef100_A7QFD3 Cluster: Chromosome undetermined scaffold_87, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome undetermined scaffold_87, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2995580.1 length: 326 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 161-181
ProfileScan PS50157 ZINC_FINGER_C2H2_2 10.346 159-186
IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:3.30.160.60 no description 0.00085 159-178
229-264
no_ID  
HMMPanther PTHR11389 ZINC 1.2e-62 113-314
HMMPanther PTHR11389:SF379AZ2-RELATED T[113-314] 1.2e-62  
HMMPfam PF13894 zf-C2H2_4 0.12 159-178
245-266
Seg seg seg NA 29-52
80-95
superfamily SSF57667 C2H2 3e-05 125-181
225-264
Wolf-PSORT
Lj3g3v2995580.1	nucl 10, cyto 2, chlo 1, plas 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2995580.1