Miyakogusa Predicted Gene
- Lj3g3v2926320.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KFH2_SOYBN |
570 |
82.7 |
90.1 |
(tr|I1KFH2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G08470.1 |
498 |
66.5 |
83.2 |
| Symbols: SSL3 | strictosidine synthase-like 3 | chr1:2682262-2683977 REVERSE LENGTH=390 |
| Medicago |
Medtr4g050190.1 |
586 |
81.5 |
90.9 |
| strictosidine synthase family protein | HC | chr4:17770363-17767231 | 20130731 |
| Soybean |
Glyma06g46550.1 |
570 |
82.7 |
90.1 |
|
| LJGI |
gnl|LJGI|TC70594 |
1237 |
97.9 |
97.9 |
similar to UniRef100_A7PGB4 Cluster: Chromosome chr6 scaffold_15, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_15, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2926320.2 |
length: 341 aa. |
| IPR011042 |
Six-bladed beta-propeller, TolB-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:2.120.10.30 |
no description |
4.4e-53 |
58-302 |
| IPR018119 |
Strictosidine synthase, conserved region |
| Biological Process |
GO:0009058 |
biosynthetic process |
|
|
| Molecular Function |
GO:0016844 |
strictosidine synthase activity |
|
|
| HMMPfam |
PF03088 |
Str_synth |
6.8e-31 |
183-270 |
| no_ID |
|
| HMMPanther |
PTHR10426 |
STRICTOSIDINE |
1.2e-163 |
1-341 |
| HMMPanther |
PTHR10426:SF5 |
STRICTOSIDINE |
1.2e-163 |
1-341 |
| superfamily |
SSF63829 |
Calcium-dependent |
6.1e-47 |
31-301 |
- Wolf-PSORT
Lj3g3v2926320.2 vacu 6, chlo 2, golg 2, nucl 1, cyto 1, plas 1, E.R. 1, cyto_nucl 1, chlo_mito 1, nucl_plas 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2926320.2 |
|