Miyakogusa Predicted Gene

Lj3g3v2923210.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M2X2_SOYBN 223 70.6 83.7 (tr|K7M2X2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G05120.1 190 60.1 73.9 | Symbols: | Helicase protein with RING/U-box domain | chr1:1471624-1476067 REVERSE LENGTH=833
Medicago Medtr4g049500.1 210 68.6 80.4 | RING/U-box helicase | HC | chr4:17406992-17415500 | 20130731
Soybean Glyma13g38580.1 223 70.6 83.7  
LJGI gnl|LJGI|TC60174 387 95.7 95.7 similar to UniRef100_A7PX42 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2923210.2 length: 153 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 8.6e-06 48-87
ProfileScan PS50089 ZF_RING_2 11.914 48-88
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.4e-12 45-94
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 63-72
no_ID  
HMMPanther PTHR10799 SWI/SNF-RELATED 7e-39 1-153
HMMPanther PTHR10799:SF62 DNA 7e-39 1-153
HMMPfam PF13923 zf-C3HC4_2 1.1e-08 45-88
superfamily SSF57850 RING/U-box 2.4e-12 11-94
Wolf-PSORT
Lj3g3v2923210.2	nucl 12, chlo 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2923210.2