| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7M2X2_SOYBN | 1275 | 70.9 | 79.1 | (tr|K7M2X2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT1G05120.1 | 1056 | 67.8 | 78.4 | | Symbols: | Helicase protein with RING/U-box domain | chr1:1471624-1476067 REVERSE LENGTH=833 |
| Medicago | Medtr4g049500.1 | 1243 | 72.9 | 79.9 | | RING/U-box helicase | HC | chr4:17406992-17415500 | 20130731 |
| Soybean | Glyma12g31910.1 | 1260 | 73.3 | 82.1 | |
| LJGI | gnl|LJGI|TC81658 | 474 | 98.8 | 98.8 | similar to UniRef100_A9TCP3 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (10%) |
| Lj3g3v2920810.1 | length: 900 aa. | |||
| IPR000330 | SNF2-related | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003677 | DNA binding | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMPfam | PF00176 | SNF2_N | 4e-64 | 209-622 |
| IPR001650 | Helicase, C-terminal | |||
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| Molecular Function | GO:0004386 | helicase activity | ||
| Molecular Function | GO:0005524 | ATP binding | ||
| HMMPfam | PF00271 | Helicase_C | 4.9e-10 | 767-844 |
| HMMSmart | SM00490 | helicase | 9.4e-15 | 761-844 |
| ProfileScan | PS51194 | HELICASE_CTER | 13.751 | 726-890 |
| IPR001841 | Zinc finger, RING-type | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMSmart | SM00184 | Ring | 9.4e-06 | 647-686 |
| ProfileScan | PS50089 | ZF_RING_2 | 11.914 | 647-687 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 3.7e-12 | 644-699 |
| IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | |||
| HMMSmart | SM00487 | DEAD-like | 2.2e-25 | 202-492 |
| ProfileScan | PS51192 | HELICASE_ATP_BIND_1 | 16.161 | 219-474 |
| IPR017907 | Zinc finger, RING-type, conserved site | |||
| PatternScan | PS00518 | ZF_RING_1 | NA | 662-671 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
| superfamily | SSF52540 | P-loop | 5.6e-57 | 151-547 548-898 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 717-738 |
| Gene3D | G3DSA:3.40.50.300 | no description | 5.7e-12 | 411-476 724-871 |
| HMMPanther | PTHR10799 | SWI/SNF-RELATED | 0 | 16-898 |
| HMMPanther | PTHR10799:SF62 | DNA | 0 | 16-898 |
| HMMPfam | PF13923 | zf-C3HC4_2 | 2e-07 | 645-687 |
| Seg | seg | seg | NA | 17-32 43-61 145-155 491-504 |
| superfamily | SSF57850 | RING/U-box | 8.7e-13 | 622-707 |
Lj3g3v2920810.1 nucl 8, mito 2, golg 2, chlo 1, cysk 1, cyto_mito 1, golg_plas 1, mito_plas 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj3g3v2920810.1 |