Miyakogusa Predicted Gene

Lj3g3v2910770.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M2X2_SOYBN 273 76.7 86.0 (tr|K7M2X2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G05120.1 246 66.1 81.6 | Symbols: | Helicase protein with RING/U-box domain | chr1:1471624-1476067 REVERSE LENGTH=833
Medicago Medtr4g049500.1 257 74.6 85.0 | RING/U-box helicase | HC | chr4:17406992-17415500 | 20130731
Soybean Glyma13g38580.1 274 76.7 86.0  
LJGI gnl|LJGI|TC80050 387 100.0 100.0 similar to UniRef100_A7R047 Cluster: Chromosome chr10 scaffold_297, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_297, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2910770.2 length: 182 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 7e-07 92-165
HMMSmart SM00490 helicase 2.3e-08 85-165
ProfileScan PS51194 HELICASE_CTER 9.194 50-182
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 8.3e-28 45-179
no_ID  
Gene3D G3DSA:3.40.50.300 no description 6.1e-09 43-168
HMMPanther PTHR10799 SWI/SNF-RELATED 1.3e-72 32-171
HMMPanther PTHR10799:SF62 DNA 1.3e-72 32-171
Wolf-PSORT
Lj3g3v2910770.2	nucl 9, chlo 3, cyto 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2910770.2