Miyakogusa Predicted Gene
- Lj3g3v2907330.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SJH1_LOTJA |
140 |
47.6 |
59.7 |
(tr|I3SJH1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G06240.1 |
60.1 |
28.6 |
47.8 |
| Symbols: | F-box family protein | chr3:1887336-1888619 FORWARD LENGTH=427 |
| Medicago |
Medtr3g103020.1 |
106 |
39.5 |
51.3 |
| galactose oxidase | HC | chr3:47452814-47451137 | 20130731 |
| Soybean |
Glyma16g27870.1 |
111 |
38.8 |
50.0 |
|
| LJGI |
gnl|LJGI|TC79504 |
478 |
97.5 |
97.5 |
weakly similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_67, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2907330.1 |
length: 185 aa. |
| IPR017451 |
F-box associated interaction domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
5.2e-13 |
29-180 |
- Wolf-PSORT
Lj3g3v2907330.1 cyto 5, extr 4, mito 2, nucl 1, cysk 1, golg 1, chlo_mito 1, cyto_mito 1, cysk_nucl 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2907330.1 |
|