Miyakogusa Predicted Gene

Lj3g3v2903000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JDG8_MEDTR 453 79.1 84.8 (tr|G7JDG8) Septum-promoting GTP-binding protein OS=Medicago truncatula GN=MTR_4g047870 PE=4 SV=1
TAIR_pep AT3G21700.3 317 79.3 90.7 | Symbols: SGP2 | Ras-related small GTP-binding family protein | chr3:7644581-7646190 FORWARD LENGTH=292
Medicago Medtr4g047870.2 453 79.1 84.8 | septum-promoting GTP-binding-like protein | HC | chr4:16887358-16882915 | 20130731
Soybean Glyma12g10670.1 447 77.9 84.7  
LJGI gnl|LJGI|TC69384 1677 100.0 100.0 similar to UniRef100_A7PXH0 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (73%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2903000.1 length: 281 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 5.9e-10 97-118
138-160
199-212
239-261
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 0.0067 99-263
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 7.2e-05 97-264
IPR013684 Mitochondrial Rho-like
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMPfam PF08477 Miro 6.2e-25 98-211
IPR017231 Small GTPase superfamily, Tem1
HMMPIR PIRSF037527 Small 8.3e-112 1-281
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9.3e-31 92-279
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.2e-24 95-262
HMMPanther PTHR24073 FAMILY 2.3e-122 54-281
HMMPanther PTHR24073:SF259SUBFAMILY NOT 2.3e-122 54-281
ProfileScan PS51419 RAB 10.970 91-281
Seg seg seg NA 59-65
Wolf-PSORT
Lj3g3v2903000.1	chlo_mito 7.33333, mito 7, chlo 6.5, cyto_mito 4.33333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2903000.1