Miyakogusa Predicted Gene
- Lj3g3v2888600.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SRU0_LOTJA |
410 |
94.1 |
94.1 |
(tr|I3SRU0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G03210.2 |
304 |
66.3 |
79.5 |
| Symbols: XTH9 | xyloglucan endotransglucosylase/hydrolase 9 | chr4:1416107-1417197 FORWARD LENGTH=262 |
| Medicago |
Medtr4g045853.1 |
372 |
82.9 |
90.2 |
| xyloglucan endotransglucosylase/hydrolase family protein | HC | chr4:15793352-15797325 | 20130731 |
| Soybean |
Glyma12g10960.1 |
370 |
82.4 |
90.2 |
|
| LJGI |
gnl|LJGI|TC69336 |
1231 |
100.0 |
100.0 |
similar to UniRef100_A1YZ21 Cluster: Xyloglucan endotransglycosylase precursor; n=1; Populus tremula x Populus tremuloides|Rep: Xyloglucan endotransglycosylase precursor - Populus tremula x Populus tremuloides, partial (91%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2888600.1 |
length: 205 aa. |
| IPR000757 |
Glycoside hydrolase, family 16 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPfam |
PF00722 |
Glyco_hydro_16 |
9.7e-38 |
3-116 |
| IPR008985 |
Concanavalin A-like lectin/glucanases superfamily |
| superfamily |
SSF49899 |
Concanavalin |
2e-58 |
7-203 |
| IPR010713 |
Xyloglucan endo-transglycosylase, C-terminal |
| Cellular Component |
GO:0005618 |
cell wall |
|
|
| Biological Process |
GO:0006073 |
cellular glucan metabolic process |
|
|
| Molecular Function |
GO:0016762 |
xyloglucan:xyloglucosyl transferase activity |
|
|
| Cellular Component |
GO:0048046 |
apoplast |
|
|
| HMMPfam |
PF06955 |
XET_C |
1.6e-16 |
148-200 |
| IPR013320 |
Concanavalin A-like lectin/glucanase, subgroup |
| Gene3D |
G3DSA:2.60.120.200 |
no description |
1.3e-81 |
1-203 |
| no_ID |
|
| HMMPanther |
PTHR31062 |
FAMILY |
9.4e-107 |
1-200 |
| Seg |
seg |
seg |
NA |
163-174 |
- Wolf-PSORT
Lj3g3v2888600.1 nucl 4, chlo 3, cyto 3, mito 1, plas 1, extr 1, vacu 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2888600.1 |
|