Miyakogusa Predicted Gene

Lj3g3v2888330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LRU2_SOYBN 1026 78.3 86.2 (tr|I1LRU2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G08070.1 498 39.5 58.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:2514374-2516599 REVERSE LENGTH=741
Medicago Medtr7g023780.1 516 41.2 62.5 | editing factor 22 | HC | chr7:7790817-7787040 | 20130731
Soybean Glyma12g11120.1 1026 78.3 86.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2888330.1 length: 630 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.01 93-118
196-216
224-249
397-422
HMMPfam PF13041 PPR_2 2e-07 121-165
325-370
HMMTigr TIGR00756 PPR: 0.00044 122-154
326-359
361-394
ProfileScan PS51375 PPR 5.634 15-52
53-87
119-153
88-118
222-256
191-221
323-357
292-322
257-291
358-393
394-424
460-494
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00061 398-489
no_ID  
HMMPanther PTHR24015 FAMILY 1.5e-261 1-630
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 1.5e-261 1-630
HMMPfam PF14432 DYW_deaminase 2e-16 508-620
Seg seg seg NA 478-494
Wolf-PSORT
Lj3g3v2888330.1	chlo 9, nucl 3, mito 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2888330.1