Miyakogusa Predicted Gene

Lj3g3v2888320.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LRU3_SOYBN 879 84.7 90.1 (tr|I1LRU3) Beta-amylase OS=Glycine max PE=3 SV=1
TAIR_pep AT4G15210.1 695 65.7 79.1 | Symbols: ATBETA-AMY, AT-BETA-AMY, RAM1, BMY1, BAM5 | beta-amylase 5 | chr4:8666734-8669357 REVERSE LENGTH=498
Medicago Medtr4g045667.1 868 81.5 91.1 | beta-amylase | HC | chr4:15502061-15504944 | 20130731
Soybean Glyma12g11130.1 879 84.7 90.1  
LJGI gnl|LJGI|TC64025 2908 99.6 99.6 similar to UniRef100_O22585 Cluster: Beta-amylase; n=1; Medicago sativa|Rep: Beta-amylase - Medicago sativa (Alfalfa), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2888320.1 length: 496 aa.
IPR001371 Glycoside hydrolase, family 14B, plant
method AccNumber shortName E-value location
Biological Process GO:0000272 polysaccharide catabolic process    
Molecular Function GO:0016161 beta-amylase activity    
FPrintScan PR00842 GLHYDLASE14B 2.7e-41 173-182
329-339
371-380
385-394
400-416
418-432
433-447
IPR001554 Glycoside hydrolase, family 14
Biological Process GO:0000272 polysaccharide catabolic process    
Molecular Function GO:0016161 beta-amylase activity    
FPrintScan PR00750 BETAAMYLASE 1.1e-97 47-61
68-86
90-111
183-205
255-274
291-307
308-319
326-349
363-385
HMMPfam PF01373 Glyco_hydro_14 1.7e-119 16-434
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 1e-216 9-447
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 6.4e-198 7-496
IPR018238 Glycoside hydrolase, family 14, conserved site
Biological Process GO:0000272 polysaccharide catabolic process    
Molecular Function GO:0016161 beta-amylase activity    
PatternScan PS00506 BETA_AMYLASE_1 NA 94-102
PatternScan PS00679 BETA_AMYLASE_2 NA 183-193
no_ID  
HMMPanther PTHR32210 FAMILY 1.3e-211 1-496
Seg seg seg NA 47-58
Wolf-PSORT
Lj3g3v2888320.1	vacu 4, E.R. 3, golg 3, chlo 1, nucl 1, plas 1, extr 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2888320.1