Miyakogusa Predicted Gene

Lj3g3v2888220.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LU20_SOYBN 924 69.7 78.0 (tr|K7LU20) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G03260.2 483 45.5 63.3 | Symbols: | Outer arm dynein light chain 1 protein | chr4:1429092-1431431 FORWARD LENGTH=677
Medicago Medtr0148s0050.1 858 68.4 74.9 | protein phosphatase 1 regulatory subunit, putative | HC | scaffold0148:20569-16579 | 20130731
Soybean Glyma06g45610.1 901 69.4 77.4  
LJGI gnl|LJGI|AV409360 803 100.0 100.0 similar to UniRef100_A7Q3B6 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2888220.1 length: 677 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS51450 LRR 4.747 413-434
435-456
457-479
480-501
502-523
528-549
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 1.6e+02 411-434
455-478
500-522
no_ID  
Gene3D G3DSA:3.80.10.10 no description 6.5e-38 397-573
HMMPanther PTHR10588 FAMILY 9.3e-138 147-593
HMMPanther PTHR10588:SF29 LEUCINE 9.3e-138 147-593
HMMPfam PF13516 LRR_6 0.38 478-497
HMMPfam PF13855 LRR_8 2.9e-09 413-468
HMMSmart SM00365 Leucine-rich 81 433-454
455-477
478-499
500-524
Seg seg seg NA 42-54
438-449
superfamily SSF52058 L 5.5e-31 397-553
Wolf-PSORT
Lj3g3v2888220.1	nucl 4.5, mito 3, cysk_nucl 3, chlo 2, mito_plas 2, cyto 1, plas 1, vacu 1, E.R. 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2888220.1