Miyakogusa Predicted Gene
- Lj3g3v2887070.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KXC8_SOYBN |
390 |
59.9 |
73.2 |
(tr|K7KXC8) Serine/threonine-protein kinase OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT4G27290.1 |
238 |
41.5 |
59.6 |
| Symbols: | S-locus lectin protein kinase family protein | chr4:13666281-13669202 FORWARD LENGTH=783 |
| Medicago |
Medtr6g012810.1 |
385 |
58.6 |
74.8 |
| Serine/Threonine kinase family protein | HC | chr6:3983877-3978050 | 20130731 |
| Soybean |
Glyma12g21030.1 |
385 |
59.9 |
72.8 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2887070.1 |
length: 312 aa. |
| IPR000742 |
Epidermal growth factor-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| ProfileScan |
PS50026 |
EGF_3 |
10.716 |
127-164 |
| IPR000858 |
S-locus glycoprotein |
| Biological Process |
GO:0048544 |
recognition of pollen |
|
|
| HMMPfam |
PF00954 |
S_locus_glycop |
2.3e-17 |
55-161 |
| IPR003609 |
Apple-like |
| HMMSmart |
SM00473 |
divergent |
2.7e-07 |
189-268 |
| ProfileScan |
PS50948 |
PAN |
8.792 |
183-269 |
| IPR013227 |
PAN-2 domain |
| HMMPfam |
PF08276 |
PAN_2 |
4.5e-17 |
188-254 |
| no_ID |
|
| HMMPanther |
PTHR11795 |
UNCHARACTERIZED |
1e-34 |
1-273 |
| HMMPanther |
PTHR11795:SF72 |
OS07G0550500 |
1e-34 |
1-273 |
- Wolf-PSORT
Lj3g3v2887070.1 cyto 4, chlo 2, nucl 2, extr 2, golg 2, cyto_pero 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2887070.1 |
|