Miyakogusa Predicted Gene

Lj3g3v2838550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LUK8_SOYBN 173 50.2 58.2 (tr|I1LUK8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G42350.1 121 56.2 74.0 | Symbols: | RING/U-box superfamily protein | chr2:17639245-17639898 FORWARD LENGTH=217
Medicago Medtr2g090950.1 154 41.8 49.8 | anaphase-promoting complex subunit 11 RING-H2 finger protein | HC | chr2:39066658-39065308 | 20130731
Soybean Glyma12g33620.1 173 50.2 58.2  
LJGI gnl|LJGI|TC57296 1467 99.9 99.9 similar to UniRef100_A7PJE0 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2838550.1 length: 247 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 4e-17 112-157
HMMSmart SM00184 Ring 2.4e-07 114-155
ProfileScan PS50089 ZF_RING_2 12.843 114-156
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 5e-20 108-159
no_ID  
HMMPanther PTHR14155 RING 5.7e-31 33-183
Seg seg seg NA 34-52
56-69
213-230
superfamily SSF57850 RING/U-box 9.4e-24 87-162
Wolf-PSORT
Lj3g3v2838550.1	chlo 4, nucl 3.5, cysk_nucl 2.5, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2838550.1