Miyakogusa Predicted Gene

Lj3g3v2838500.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LUJ9_SOYBN 347 86.7 87.2 (tr|I1LUJ9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G75840.1 319 78.1 83.7 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP binding protein 5 | chr1:28475964-28477377 FORWARD LENGTH=196
Medicago Medtr2g090875.1 342 85.7 86.7 | Rho-like GTP-binding protein | HC | chr2:39006073-39004055 | 20130731
Soybean Glyma12g33560.2 347 86.7 87.2  
LJGI gnl|LJGI|TC65221 1172 100.0 100.0 UniRef100_Q40220 Cluster: Rac-like GTP-binding protein RAC2 precursor; n=1; Lotus japonicus|Rep: Rac-like GTP-binding protein RAC2 precursor - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2838500.1 length: 196 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 1.2e-37 7-28
30-46
47-69
109-122
155-177
HMMPfam PF00071 Ras 2.1e-52 8-178
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 4.7e-113 9-180
ProfileScan PS51420 RHO 25.233 1-177
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 1.3e-29 7-180
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 9.9e-33 7-171
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 8.8e-24 4-180
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4.5e-54 2-190
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.3e-61 7-183
HMMPanther PTHR24072 FAMILY 9e-151 1-191
HMMPanther PTHR24072:SF67 SUBFAMILY 9e-151 1-191
Seg seg seg NA 81-92
180-192
Wolf-PSORT
Lj3g3v2838500.1	chlo 6, plas 4, pero 2, nucl_plas 2, golg_plas 2, cysk_plas 2, E.R._plas 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2838500.1