Miyakogusa Predicted Gene

Lj3g3v2838450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q40199_LOTJA 196 100.0 100.0 (tr|Q40199) RAB11I (Fragment) OS=Lotus japonicus GN=rab11I PE=2 SV=1
TAIR_pep AT5G60860.1 155 77.9 87.4 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F | chr5:24484750-24485565 FORWARD LENGTH=217
Medicago Medtr4g079350.1 160 80.2 89.6 | RAB GTPase-like protein C2B | HC | chr4:30648654-30646057 | 20130731
Soybean Glyma12g14070.1 162 81.2 89.6  
LJGI gnl|LJGI|TC58220 561 100.0 100.0 RAB11I [Lotus japonicus]
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2838450.1 length: 93 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMPfam PF00071 Ras 1.8e-13 1-54
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 0.00018 1-56
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.8e-13 1-92
no_ID  
Gene3D G3DSA:3.40.50.300 no description 1.1e-15 1-74
HMMPanther PTHR24073 FAMILY 1.9e-31 1-92
HMMPanther PTHR24073:SF87 SUBFAMILY 1.9e-31 1-92
ProfileScan PS51419 RAB 11.404 1-91
Wolf-PSORT
Lj3g3v2838450.1	cyto 5, chlo 3, pero 3, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2838450.1