Miyakogusa Predicted Gene

Lj3g3v2809070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T3F4_LOTJA 973 97.3 97.3 (tr|I3T3F4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G20710.1 380 43.9 64.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:8926110-8927722 FORWARD LENGTH=490
Medicago Medtr2g090290.1 638 66.3 78.4 | PPR containing plant protein | HC | chr2:38388050-38391519 | 20130731
Soybean Glyma13g37360.1 525 66.4 77.9  
LJGI gnl|LJGI|TC72511 2849 99.3 99.3 weakly similar to UniRef100_A7PJ25 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2809070.1 length: 489 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00029 138-163
171-200
206-232
241-265
349-375
HMMTigr TIGR00756 PPR: 0.00069 171-201
349-379
ProfileScan PS51375 PPR 5.141 134-164
169-203
239-269
344-378
309-339
275-305
379-413
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.1e-11 348-407
no_ID  
HMMPanther PTHR24015 FAMILY 1.5e-129 33-448
HMMPanther PTHR24015:SF160LIPOYLTRANSFERASE, PUTATIVE 1.5e-129 33-448
Seg seg seg NA 152-163
superfamily SSF48452 TPR-like 0.0017 237-410
173-268
Wolf-PSORT
Lj3g3v2809070.1	chlo 9, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2809070.1