Miyakogusa Predicted Gene
- Lj3g3v2807940.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T7A2_LOTJA |
378 |
100.0 |
100.0 |
(tr|I3T7A2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT3G51000.1 |
110 |
37.6 |
58.4 |
| Symbols: | alpha/beta-Hydrolases superfamily protein | chr3:18945258-18946499 REVERSE LENGTH=323 |
| Medicago |
Medtr2g090245.1 |
337 |
87.5 |
92.9 |
| epoxide hydrolase-like protein | HC | chr2:38348854-38351491 | 20130731 |
| Soybean |
Glyma13g37430.1 |
331 |
87.5 |
94.0 |
|
| LJGI |
gnl|LJGI|TC67689 |
605 |
99.4 |
99.4 |
similar to UniRef100_A7PWY7 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (73%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v2807940.1 |
length: 184 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.50.1820 |
no description |
3.2e-21 |
11-181 |
| HMMPanther |
PTHR10992 |
ALPHA/BETA |
8.6e-54 |
13-181 |
| HMMPanther |
PTHR10992:SF279EPOXIDE |
HYDROLASE-RELATED |
8.6e-54 |
13-181 |
| HMMPfam |
PF12697 |
Abhydrolase_6 |
5.1e-06 |
72-173 |
| superfamily |
SSF53474 |
alpha/beta-Hydrolases |
1.9e-15 |
73-181 |
- Wolf-PSORT
Lj3g3v2807940.1 cyto 5.5, cyto_nucl 4, chlo 2, nucl 1.5, chlo_mito 1.5, mito 1, extr 1, E.R. 1, pero 1, golg_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v2807940.1 |
|