| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7LU49_SOYBN | 277 | 52.5 | 62.6 | (tr|K7LU49) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT1G03530.1 | 196 | 55.9 | 68.1 | | Symbols: ATNAF1, NAF1 | nuclear assembly factor 1 | chr1:880638-883338 REVERSE LENGTH=801 |
| Medicago | Medtr0072s0050.1 | 251 | 51.3 | 64.3 | | Gar1/Naf1 RNA-binding region protein | HC | scaffold0072:33818-29673 | 20130731 |
| Soybean | Glyma12g11810.1 | 276 | 52.5 | 62.6 | |
| LJGI | gnl|LJGI|FS359495 | 755 | 98.3 | 98.3 |
| Lj3g3v2779500.1 | length: 704 aa. | |||
| IPR007504 | H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0030515 | snoRNA binding | ||
| Biological Process | GO:0031120 | snRNA pseudouridine synthesis | ||
| Biological Process | GO:0042254 | ribosome biogenesis | ||
| HMMPfam | PF04410 | Gar1 | 9e-26 | 191-325 |
| IPR009000 | Translation elongation/initiation factor/Ribosomal, beta-barrel | |||
| superfamily | SSF50447 | Translation | 3.9e-12 | 203-265 |
| no_ID | ||||
| Gene3D | G3DSA:2.40.10.230 | no description | 4.1e-12 | 198-269 |
| HMMPanther | PTHR31633 | FAMILY | 7.4e-22 | 104-620 |
| HMMPanther | PTHR31633:SF0 | SUBFAMILY | 7.4e-22 | 104-620 |
| Seg | seg | seg | NA | 44-59 77-95 106-121 134-162 300-312 384-396 518-529 |
Lj3g3v2779500.1 nucl 12, vacu 1, E.R. 1, E.R._vacu 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj3g3v2779500.1 |