Miyakogusa Predicted Gene

Lj3g3v2769380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7M2S2_SOYBN 1919 92.7 95.9 (tr|K7M2S2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G12470.1 1687 80.5 89.8 | Symbols: | zinc ion binding | chr1:4251359-4257201 FORWARD LENGTH=988
Medicago Medtr8g063380.1 1900 91.1 93.9 | vacuolar sorting-associated-like protein | HC | chr8:26642088-26651844 | 20130731
Soybean Glyma13g37690.2 1919 92.7 95.9  
LJGI gnl|LJGI|TC82472 1409 99.9 99.9 similar to UniRef100_A7Q380 Cluster: Chromosome chr12 scaffold_47, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_47, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2769380.1 length: 990 aa.
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
HMMPfam PF00637 Clathrin 2e-11 607-745
IPR007810 Pep3/Vps18/deep orange
HMMPfam PF05131 Pep3_Vps18 7.8e-39 249-403
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 9.5e-05 941-948
no_ID  
Coil coil coiled-coil NA 785-820
HMMPanther PTHR23323 VACUOLAR 0 23-976
HMMPanther PTHR23323:SF32 VACUOLAR 0 23-976
Seg seg seg NA 301-304
superfamily SSF57850 RING/U-box 5e-06 816-885
Wolf-PSORT
Lj3g3v2769380.1	cyto 5, chlo 4, nucl 2, chlo_mito 2, cysk 1.5, cysk_plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2769380.1